It’s not quite as point-and-click, but I’m using Docker for that because Yunohost kept messing up updates. Most server apps will have some instructions on how to run them in docker, especially a docker-compose.yml file, so you don’t have to rely on the Yunohost team to package said app.

The way I do it is that I put each suggested compose file in their own file, and import them in my main docker-compose.yml file like this:

version:  '3'
include:
    - syncthing.yml

Then just run docker compose pull && docker compose up -d every time you change something or want to update your apps, and you’re good to go.

Software updates in particular are waaaaaayyy easier on Docker than Yunohost.